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Research Article
TRBP–Dicer interaction may enhance HIV-1 TAR RNA translation via TAR RNA processing, repressing host-cell apoptosis
Chiaki Komori, Tomoko Takahashi, Yuko Nakano, Kumiko Ui-Tei
Biology Open 2020 9: bio050435 doi: 10.1242/bio.050435 Published 25 February 2020
Chiaki Komori
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Hongo, Tokyo 113-0033, Japan
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Tomoko Takahashi
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Hongo, Tokyo 113-0033, Japan
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Yuko Nakano
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Hongo, Tokyo 113-0033, Japan
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Kumiko Ui-Tei
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Hongo, Tokyo 113-0033, Japan
2Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwano-ha, Chiba 277-8561, Japan
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  • ORCID record for Kumiko Ui-Tei
  • For correspondence: ktei@bs.s.u-tokyo.ac.jp
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ABSTRACT

The transactivating response (TAR) RNA-binding protein (TRBP) has been identified as a double-stranded RNA (dsRNA)-binding protein, which associates with a stem-loop region known as the TAR element in human immunodeficiency virus-1 (HIV-1). However, TRBP is also known to be an enhancer of RNA silencing, interacting with Dicer, an enzyme that belongs to the RNase III family. Dicer cleaves long dsRNA into small dsRNA fragments called small interfering RNA or microRNA (miRNA) to mediate RNA silencing. During HIV-1 infection, TAR RNA-mediated translation is suppressed by the secondary structure of 5′UTR TAR RNA. However, TRBP binding to TAR RNA relieves its inhibitory action of translation and Dicer processes HIV-1 TAR RNA to generate TAR miRNA. However, whether the interaction between TRBP and Dicer is necessary for TAR RNA translation or TAR miRNA processing remains unclear. In this study, we constructed TRBP mutants that were unable to interact with Dicer by introducing mutations into amino acid residues necessary for the interaction. Furthermore, we established cell lines expressing such TRBP mutants. Then, we revealed that the TRBP–Dicer interaction is essential for both the TAR-containing RNA translation and the TAR miRNA processing in HIV-1.

Footnotes

  • Competing interests

    The authors declare no competing or financial interests.

  • Author contributions

    Conceptualization: K.U.-T.; Methodology: C.K., T.T., Y.N., K.U.-T.; Validation: C.K., Y.N.; Formal analysis: C.K., T.T., Y.N., K.U.-T.; Investigation: C.K., T.T., Y.N., K.U.-T.; Resources: T.T., K.U.-T.; Data curation: C.K., T.T., K.U.-T.; Writing - original draft: K.U.-T.; Writing - review & editing: K.U.-T.; Visualization: C.K., T.T.; Supervision: K.U.-T.; Project administration: K.U.-T.; Funding acquisition: T.T., K.U.-T.

  • Funding

    This work was supported by grants from the Ministry of Education, Culture, Sports, Science and Technology of Japan [21310123, 21115004, 15H04319, 16H14640, 221S0002, 16H06279 to K.U.-T., 15K19124, 18K15178 to T.T.].

  • Supplementary information

    Supplementary information available online at http://bio.biologists.org/lookup/doi/10.1242/bio.050435.supplemental

  • Received December 23, 2019.
  • Accepted February 3, 2020.
  • © 2020. Published by The Company of Biologists Ltd
http://creativecommons.org/licenses/by/4.0

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.

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Keywords

  • TRBP
  • Dicer
  • TAR miRNA
  • Infection
  • Translational regulation

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Research Article
TRBP–Dicer interaction may enhance HIV-1 TAR RNA translation via TAR RNA processing, repressing host-cell apoptosis
Chiaki Komori, Tomoko Takahashi, Yuko Nakano, Kumiko Ui-Tei
Biology Open 2020 9: bio050435 doi: 10.1242/bio.050435 Published 25 February 2020
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Research Article
TRBP–Dicer interaction may enhance HIV-1 TAR RNA translation via TAR RNA processing, repressing host-cell apoptosis
Chiaki Komori, Tomoko Takahashi, Yuko Nakano, Kumiko Ui-Tei
Biology Open 2020 9: bio050435 doi: 10.1242/bio.050435 Published 25 February 2020

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